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Advanced BrainVISA training
BrainVISA/Anatomist version 3.1 available on the web !
JIRFNI : TP BrainVISA & Anatomist
Soutenance de thèse de Matthieu Perrot
Soutenance HDR Philippe Ciuciu
People
Research scientists
Alexis Roche
Bertrand Thirion
Cyril Poupon
Denis Rivière
Edouard Duchesnay
Jean-François Mangin
Philippe Ciuciu
Short bio
Pierre Fillard
Bringing Brainvisa and MedINRIA together
High quality volume rendering using VTK
Osirix-like VTK Views
Popup menus in new medINIRA
Short bio
Tractography using an adpative spin-glass model
Yann Cointepas
Short bio
IMAGEN group
Alexis Barbot
Benjamin Thyreau
Bio
Jean-Baptiste Poline
Bio
Yannick Schwartz
Bio
Interns
Virgile Fritsch
Surface-based fMRI data analyses improvement
PhD Students
(Joy) Zhong Yi Sun
Alan Tucholka
Anne-Laure Fouque
Cécilia Damon
CV
Edith Le Floch
Eric Jouvent
Linda Marrakchi
Lotfi Chaâri
Merlin Keller
Pamela Guevara
CV
Pauline Roca
Thomas Vincent
Valdis Gudmundsdottir
Vincent Michel
Post-doc fellows
Alexandre Gramfort
bio
Gael Varoquaux
Grégory Operto
Irina Kezele
Julien Lefèvre
Research Interests
Short Bio
Laurent Risser
Short biography
Matthieu Perrot
Maxime Descoteaux
New article
Software development
Christian Chauvain
Dominique Geffroy
Mission
Isabelle Denghien
Lise Favre
Nicolas Souedet
Close collaborators
CEA/DSV/I2BM
Grenoble
Grenoble Institut des NeuroSciences
INRIAlpes
IFR49
Marseille
Bibliography
Software
Projects
Base Archi
Scientific description of the project
Structural MRI protocol
Functional MRI protocol
Roadmap and funding
Bay time calendar
NucleiPark
Introduction
Summary
Partnership
NeuroSpin team
INSERM teams
INRIA teams
Scientific motivation
State of the art
Aims of the project
Scientific program
Strategy of the study and Innovation (translational research)
Selection and evaluation of the patients
Innovative imaging techniques
Tasks or work-packages
Preliminary data
High resolution images of the SN, STN and RN at 7T
High angular resolution diffusion images of the brain stem
Task 1 - Structural and diffusion-weighted MR imaging protocol
Standard T1, T2 and T2*-weighted images
High angular resolution diffusion imaging (HARDI)
Task 2 - Animal study preliminary to the human study
Brainstem atlas
Task 3 - Human studies on patients and controls, ethics
Patient recruitment
Control recruitment
Clinical examination at the time of the study
Acquisitions
Ethics
Task 4 - Data analysis
Morphometric analysis: automatic localization of deep brain nuclei
Volumetric analysis
Anatomical connectivity inference from HARDI data
Coregistration with post-mortem brain atlas: location of brainstem structures and relations with clinical symptoms in Parkinson’s disease and PSP
Grants
Reports / Comptes-rendus
Réunion préparatoire du 8 Mars 2010
Réunion de mise en place du 22 Mars 2010
Réunion scientifique de présentation du projet à NeuroSpin, le 29 mars 2010
Compte-rendu suite à session sur premier patient
Réunion résolution problèmes budget du 1 Juillet 2010
Réunion Atlas Cerveau Humain / Cerveau Primate / Clinique, le 22 Juillet 2010
Bay time calendar on the 7T Human MRI system
Year 2010
SCHUBERT (Young researcher ANR project funded in 2009)
Composition of the team
Overview
SCHUBERT At a glance
Quick Links
Practical information
Access
Contacts
The Fiber Cup
Details on the spatial positions
Download Section
Fiber Cup dataset now available for download!
Goal
How to evaluate your own results?
Submission format: what is a fiber file?
Technical details about the phantom
Voxel to real world coordinates
MICCAI’09 Contest
Committee
Fiber Cup Program
Results and Conclusions
Winners announced!
agenda
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Editors area
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Bibliography
List of publications
Published on Thursday 8 May 2008
Update Thursday 26 June 2008
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Update Monday 23 August 2010