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Advanced BrainVISA training
BrainVISA/Anatomist version 3.1 available on the web !
JIRFNI : TP BrainVISA & Anatomist
Soutenance de thèse de Matthieu Perrot
Soutenance HDR Philippe Ciuciu
People
Research scientists
Bertrand Thirion
Cyril Poupon
Bibliographie
Courses and slides
Curriculum vitae
Projets
Untitled
Bibliography
Denis Rivière
Edouard Duchesnay
Gael Varoquaux
Jean-Baptiste Poline
Bio
Jean-François Mangin
Philippe Ciuciu
Short bio
Talks
Post-modern fMRI data analysis in parallel imaging
Pierre Fillard
Bringing Brainvisa and MedINRIA together
High quality volume rendering using VTK
Osirix-like VTK Views
Popup menus in new medINIRA
Short bio
Tractography using an adpative spin-glass model
Yann Cointepas
Short bio
Post-doc fellows
Irina Kezele
Thomas Vincent
PhD Students
Anne-Laure Fouque
Edith Le Floch
Virgile Fritsch
Surface-based fMRI data analyses improvement
Yannick Schwartz
Bio
Software development
Dominique Geffroy
Mission
Isabelle Denghien
Nicolas Souedet
CATI project
(Joy) Zhong Yi Sun
Grégory Operto
Matthieu Perrot
Past people
Post-doc fellows
Alexandre Gramfort
bio
Julien Lefèvre
Research Interests
Short Bio
Laurent Risser
Short biography
Maxime Descoteaux
New article
PhD students
Alan Tucholka
Cécilia Damon
CV
Eric Jouvent
Linda Marrakchi
Lotfi Chaâri
Merlin Keller
Pamela Guevara
CV
Pauline Roca
Valdis Gudmundsdottir
Vincent Michel
Engineers
Alexis Barbot
Benjamin Thyreau
Bio
Close collaborators
Alexis Roche
CEA/DSV/I2BM
Grenoble
Grenoble Institut des NeuroSciences
INRIAlpes
IFR49
Marseille
Bibliography
Software
Projects
Base Archi
Scientific description of the project
Structural MRI protocol
Functional MRI protocol
Roadmap and funding
Bay time calendar
NucleiPark
Introduction
Summary
Partnership
NeuroSpin team
INSERM teams
INRIA teams
Scientific motivation
State of the art
Aims of the project
Scientific program
Strategy of the study and Innovation (translational research)
Selection and evaluation of the patients
Innovative imaging techniques
Tasks or work-packages
Preliminary data
High resolution images of the SN, STN and RN at 7T
High angular resolution diffusion images of the brain stem
Task 1 - Structural and diffusion-weighted MR imaging protocol
Standard T1, T2 and T2*-weighted images
High angular resolution diffusion imaging (HARDI)
Task 2 - Animal study preliminary to the human study
Brainstem atlas
Task 3 - Human studies on patients and controls, ethics
Patient recruitment
Control recruitment
Clinical examination at the time of the study
Acquisitions
Ethics
Task 4 - Data analysis
Morphometric analysis: automatic localization of deep brain nuclei
Volumetric analysis
Anatomical connectivity inference from HARDI data
Coregistration with post-mortem brain atlas: location of brainstem structures and relations with clinical symptoms in Parkinson’s disease and PSP
Grants
Reports / Comptes-rendus
Réunion préparatoire du 8 Mars 2010
Réunion de mise en place du 22 Mars 2010
Réunion scientifique de présentation du projet à NeuroSpin, le 29 mars 2010
Compte-rendu suite à session sur premier patient
Réunion résolution problèmes budget du 1 Juillet 2010
Réunion Atlas Cerveau Humain / Cerveau Primate / Clinique, le 22 Juillet 2010
Réunion sur l’analyse statistique des données du 7 septembre 2010
Réunion budget et scientifique du 5 octobre 2010
Bay time calendar on the 7T Human MRI system
Year 2010
Practical information
SCHUBERT (Young researcher ANR project funded in 2009)
Composition of the team
Overview
SCHUBERT At a glance
Quick Links
Practical information
Access
Contacts
Atlases
BSA Atlas (Brainvisa Sulci atlas) v.2011
Lab meeting
2010
09/21/2010
09/28/2010
10/05/2010
10/19/2010
11/02/2010: no meeting because CEA is closed
11/23/2010
11/30/2010
12/14/2010
Upcoming talks
01/04/2011 - E. Le Floch
01/18/2011 - A.L. Fouque
01/25/2011 - F. Pedregosa
02/15/2011 - D. Rivière
02/22/2011 - V. Siless
03/01/2011 - F. Rousseau (LSIIT, Strasbourg)
03/15/2011 - G. Varoquaux
03/22/2011 - T. Vincent
03/29/2011 - V. Frouin
04/19/2011 - V. Fritsch
04/26/2011 - G. Varoquaux
05/10/2011 - S. Badillo
05/17/2011 - P. Ciuciu
05/24/2011 - Jun Sung PArk
05/31/2011 - P. Guevara
06/14/2011 - G. Operto
09/13/2011 - C. Boyer
11/15/2011 - G. Varoquaux
11/22/2011 - P. Ciuciu
11/29/2011 - N. Zilber
12/06/2011 - L. Risser
12/20/2011 - F. De Guio
The Fiber Cup
Details on the spatial positions
Download Section
Fiber Cup dataset now available for download!
Goal
How to evaluate your own results?
Submission format: what is a fiber file?
Technical details about the phantom
Voxel to real world coordinates
MICCAI’09 Contest
Committee
Fiber Cup Program
Results and Conclusions
Winners announced!

 
 

Valdis Gudmundsdottir
 
 
To be completed
 
 
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  Update Monday 14 November 2011