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BrainVISA/Anatomist version 3.1 available on the web !
JIRFNI : TP BrainVISA & Anatomist
Soutenance de thèse de Matthieu Perrot
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Philippe Ciuciu
Short bio
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Post-modern fMRI data analysis in parallel imaging
Pierre Fillard
Bringing Brainvisa and MedINRIA together
High quality volume rendering using VTK
Osirix-like VTK Views
Popup menus in new medINIRA
Short bio
Tractography using an adpative spin-glass model
Yann Cointepas
Short bio
Post-doc fellows
Irina Kezele
Thomas Vincent
PhD Students
Anne-Laure Fouque
Edith Le Floch
Virgile Fritsch
Surface-based fMRI data analyses improvement
Yannick Schwartz
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CATI project
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bio
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Maxime Descoteaux
New article
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Vincent Michel
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Marseille
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Base Archi
Scientific description of the project
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NucleiPark
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Tasks or work-packages
Preliminary data
High resolution images of the SN, STN and RN at 7T
High angular resolution diffusion images of the brain stem
Task 1 - Structural and diffusion-weighted MR imaging protocol
Standard T1, T2 and T2*-weighted images
High angular resolution diffusion imaging (HARDI)
Task 2 - Animal study preliminary to the human study
Brainstem atlas
Task 3 - Human studies on patients and controls, ethics
Patient recruitment
Control recruitment
Clinical examination at the time of the study
Acquisitions
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Task 4 - Data analysis
Morphometric analysis: automatic localization of deep brain nuclei
Volumetric analysis
Anatomical connectivity inference from HARDI data
Coregistration with post-mortem brain atlas: location of brainstem structures and relations with clinical symptoms in Parkinson’s disease and PSP
Grants
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Réunion préparatoire du 8 Mars 2010
Réunion de mise en place du 22 Mars 2010
Réunion scientifique de présentation du projet à NeuroSpin, le 29 mars 2010
Compte-rendu suite à session sur premier patient
Réunion résolution problèmes budget du 1 Juillet 2010
Réunion Atlas Cerveau Humain / Cerveau Primate / Clinique, le 22 Juillet 2010
Réunion sur l’analyse statistique des données du 7 septembre 2010
Réunion budget et scientifique du 5 octobre 2010
Bay time calendar on the 7T Human MRI system
Year 2010
Practical information
SCHUBERT (Young researcher ANR project funded in 2009)
Composition of the team
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SCHUBERT At a glance
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Atlases
BSA Atlas (Brainvisa Sulci atlas) v.2011
Lab meeting
2010
09/21/2010
09/28/2010
10/05/2010
10/19/2010
11/02/2010: no meeting because CEA is closed
11/23/2010
11/30/2010
12/14/2010
Upcoming talks
01/04/2011 - E. Le Floch
01/18/2011 - A.L. Fouque
01/25/2011 - F. Pedregosa
02/15/2011 - D. Rivière
02/22/2011 - V. Siless
03/01/2011 - F. Rousseau (LSIIT, Strasbourg)
03/15/2011 - G. Varoquaux
03/22/2011 - T. Vincent
03/29/2011 - V. Frouin
04/19/2011 - V. Fritsch
04/26/2011 - G. Varoquaux
05/10/2011 - S. Badillo
05/17/2011 - P. Ciuciu
05/24/2011 - Jun Sung PArk
05/31/2011 - P. Guevara
06/14/2011 - G. Operto
09/13/2011 - C. Boyer
11/15/2011 - G. Varoquaux
11/22/2011 - P. Ciuciu
11/29/2011 - N. Zilber
12/06/2011 - L. Risser
12/20/2011 - F. De Guio
The Fiber Cup
Details on the spatial positions
Download Section
Fiber Cup dataset now available for download!
Goal
How to evaluate your own results?
Submission format: what is a fiber file?
Technical details about the phantom
Voxel to real world coordinates
MICCAI’09 Contest
Committee
Fiber Cup Program
Results and Conclusions
Winners announced!

 
 

Thomas Vincent
 
 
To be completed
 
 
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  Update Monday 14 November 2011